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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7000132 chr8:11030935 T/C SGK223 chr8:8175258-8244008:- 0.46 8.46 3.21E-16 Box Plot
THCA rs7000276 chr8:10804843 G/A SGK223 chr8:8175258-8244008:- 0.38 7.01 8.17E-12 Box Plot
THCA rs7000431 chr8:10885667 A/T SGK223 chr8:8175258-8244008:- 0.35 5.87 7.93E-9 Box Plot
THCA rs7000772 chr8:10795613 A/G SGK223 chr8:8175258-8244008:- 0.32 6.27 7.88E-10 Box Plot
THCA rs7001456 chr8:10804865 C/G SGK223 chr8:8175258-8244008:- 0.36 6.81 3.03E-11 Box Plot
THCA rs7001593 chr8:3258088 A/C CSMD1 chr8:2792875-4852494:- -0.5 -10.31 1.23E-22 Box Plot
THCA rs7001737 chr8:63075418 G/A PCDH7 chr4:30722037-31148427:+ -0.31 -5.89 7.26E-9 Box Plot
THCA rs7003241 chr8:11169075 A/G SGK223 chr8:8175258-8244008:- -0.39 -7.42 5.38E-13 Box Plot
THCA rs7003360 chr8:10150070 G/C SGK223 chr8:8175258-8244008:- -0.33 -6.3 6.73E-10 Box Plot
THCA rs7003792 chr8:11781464 T/C SGK223 chr8:8175258-8244008:- 0.37 6.77 3.9E-11 Box Plot
THCA rs7004254 chr8:10148447 A/G SGK223 chr8:8175258-8244008:- -0.33 -6.3 6.73E-10 Box Plot
THCA rs7004362 chr8:11135974 G/A SGK223 chr8:8175258-8244008:- 0.39 7.26 1.6E-12 Box Plot
THCA rs7005316 chr8:3294152 A/T CSMD1 chr8:2792875-4852494:- -0.36 -6.43 3.12E-10 Box Plot
THCA rs7005363 chr8:10283748 C/T SGK223 chr8:8175258-8244008:- 0.33 6.28 7.83E-10 Box Plot
THCA rs7005469 chr8:11194457 G/A SGK223 chr8:8175258-8244008:- -0.36 -6.75 4.19E-11 Box Plot